Cooperation between genomics and proteomics

Absciex and Illumina recently jointly launched the oneomics? Program, which aims to combine new generation proteomics (NGP) and new generation sequencing (NGS) tools in the cloud computing environment As part of the project, Illumina's application store basespace will host absciex's swath? Proteomics cloud tool, which makes basespace a one-stop hub for genomics and proteomics "big data" Swath? Acquisition software adopts data independent acquisition method, which can systematically generate complete and high-specific fragment ion panorama By using target data analysis method, it can query the existence of any protein of interest and quantify it The traditional "shotgun" proteomics method is difficult to repeat because of incomplete protein determination, while swath? Software solves the problem of data loss, making repeated proteomics research feasible for the first time According to absciex, swath software can view thousands of proteins at a time, with almost no method development With cloud applications today, customers can process data 50 times faster Rainer Blair, President of absciex, said: "the oneomics program will bring better results to group research We have developed four swathapps to support mass spectrometry data processing, analysis and viewing " The four applications are: ? proteinexpressionextractor – process raw MS data ? protein expression assembler – protein folding analysis ? proteinexpressionbrowser – view results in a biological context ? proteinexpressionanalytics - data quality audit In recent years, both NGP and ngs are producing a lot of data Absciex and Illumina can store, retrieve and manage large and complex datasets safely, and view them in the biological background, thus solving the bottleneck in biomedical research "With this platform, researchers can build predictable and actionable disease models more quickly and efficiently," said Professor ruedi aebersald of the Federal Institute of technology in Zurich It shifts the focus of multi-slice analysis of biological systems from laboratory data acquisition to computing, enabling large data sets to be shared globally " Nicholas naclerio, Illumina's senior vice president of enterprise development, said: "these new proteomics tools add the ability of system biology to basespace, create an easy-to-use cloud computing environment, and realize rapid data analysis Today, basespace enables anyone who wants to understand biology at the system level to apply informatics "